Publications

2020

• Dissecting the DNA binding landscape and gene regulatory network of p63 and p53.
  Riege K, Kretzmer H, Sahm A, McDade SS, Hoffmann S, Fischer M
  Elife 2020, 9, e63266
  
• Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition.
  Rodriguez-Martin B, Alvarez EG, Baez-Ortega A, Zamora J, Supek F, Demeulemeester J, Santamarina M, Ju YS, Temes J, Garcia-Souto D, Detering H, Li Y, Rodriguez-Castro J, Dueso-Barroso A, Bruzos AL, Dentro SC, Blanco MG, Contino G, Ardeljan D, Tojo M, Roberts ND, Zumalave S, Edwards PA, Weischenfeldt J, Puiggròs M, Chong Z, Chen K, Lee EA, Wala JA, Raine KM, Butler A, Waszak SM, Navarro FCP, Schumacher SE, Monlong J, Maura F, Bolli N, Bourque G, Gerstein M, Park PJ, Wedge DC, Beroukhim R, Torrents D, Korbel JO, Martincorena I, Fitzgerald RC, Van Loo P, Kazazian HH, Burns KH, PCAWG Structural Variation Working Group, Campbell PJ, Tubio JMC, PCAWG Consortium
  Nat Genet 2020, 52(3), 306-19
  
• PLCγ1 suppression promotes the adaptation of KRAS-mutant lung adenocarcinomas to hypoxia.
  Saliakoura M, Rossi Sebastiano M, Pozzato C, Heidel FH, Schnöder TM, Savic Prince S, Bubendorf L, Pinton P, A Schmid R, Baumgartner J, Freigang S, Berezowska SA, Rimessi A, Konstantinidou G
  Nat Cell Biol 2020, 22(11), 1382-95
  
• Tumor suppressor p53: from engaging DNA to target gene regulation.
  Sammons*/** MA, Nguyen*/** TAT, McDade*/** SS, Fischer*/** M
  Nucleic Acids Res 2020, 48(16), 8848-69 * equal contribution, ** co-corresponding authors
  
• A virtual "Werkstatt" for digitization in the sciences
  Samuel S, Shadaydeh M, Böcker S, Brügmann B, Bucher SF, Deckert V, Denzler J, Dittrich P, Eggeling F, Güllmar D, Guntinas-Lichius O, König-Ries B, Löffler F, Maicher L, Marz M, Migliavacca M, Reichenbach JR, Reichstein M, Römermann C, Wittig A
  Res Ideas Outcomes 2020, 6, e54106
  
• Elevated Hedgehog activity contributes to attenuated DNA damage responses in aged hematopoietic cells.
  Scheffold A, Baig AH, Chen Z, von Löhneysen SE, Becker F, Morita Y, Avila AI, Groth M, Lechel A, Schmid F, Kraus JM, Kestler HA, Stilgenbauer S, Philipp M, Burkhalter MD
  Leukemia 2020, 34(4), 1125-34
  
• Wnt7a Counteracts Cancer Cachexia.
  Schmidt M, Poser C, von Maltzahn J
  Mol Ther Oncolytics 2020, 16, 134-46
  
• Wt1 Positive dB4 Neurons in the Hindbrain Are Crucial for Respiration
  Schnerwitzki* D, Hayn* C, Perner B, Englert C
  Front. Neurosci. 2020, 14, 529487 * equal contribution
  
• Proteomic analyses of muscle stem cells and their niche reveal novel factors affecting regeneration of skeletal muscle during aging
  Schüler SC
  Dissertation 2020, Jena, Germany
  
• Stem Cell Aging: The Upcoming Era of Proteins and Metabolites.
  Schüler* SC, Gebert* N, Ori A
  Mech Ageing Dev 2020, 190, 111288 * equal contribution