Publications

2010

• Haplotyping and copy number estimation of the highly polymorphic human beta-defensin locus on 8p23 by 454 amplicon sequencing.
  Taudien S, Groth M, Huse K, Petzold A, Szafranski K, Hampe J, Rosenstiel P, Schreiber S, Platzer M
  BMC Genomics 2010, 11, 252
  
• Assisted reproductive technologies do not enhance the variability of DNA methylation imprints in human.
  Tierling S, Souren NY, Gries J, Loporto C, Groth M, Lutsik P, Neitzel H, Utz-Billing I, Gillessen-Kaesbach G, Kentenich H, Griesinger G, Sperling K, Schwinger E, Walter J
  J Med Genet 2010, 47(6), 371-6
  
• Transcriptome analysis of the sex pheromone gland of the noctuid moth Heliothis virescens.
  Vogel H, Heidel AJ, Heckel DG, Groot AT
  BMC Genomics 2010, 11, 29
  
• A poke into the diversity and associations within human anterior nare microbial communities.
  Wos-Oxley ML, Plumeier I, von Eiff C, Taudien S, Platzer M, Vilchez-Vargas R, Becker K, Pieper DH
  ISME J 2010, 4(7), 839-51
  
• Comparative gene expression in toxic versus non-toxic strains of the marine dinoflagellate Alexandrium minutum.
  Yang I, John U, Beszteri S, Glöckner G, Krock B, Goesmann A, Cembella AD
  BMC Genomics 2010, 11, 248
  

2009

• A highly conserved retinoic acid responsive element controls wt1a expression in the zebrafish pronephros.
  Bollig** F, Perner B, Besenbeck B, Köthe S, Ebert C, Taudien S, Englert** C
  Development 2009, 136(17), 2883-92 ** co-corresponding authors
  
• Systematic evaluation of the effect of common SNPs on pre-mRNA splicing.
  ElSharawy A, Hundrieser B, Brosch M, Wittig M, Huse K, Platzer M, Becker A, Simon M, Rosenstiel P, Schreiber S, Krawczak M, Hampe J
  Hum Mutat 2009, 30(4), 625-32
  
• Polyketide assembly lines of uncultivated sponge symbionts from structure-based gene targeting.
  Fisch KM, Gurgui C, Heycke N, van der Sar SA, Anderson SA, Webb VL, Taudien S, Platzer M, Rubio BK, Robinson SJ, Crews P, Piel J
  Nat Chem Biol 2009, 5(7), 494-501
  
• An intronic single base exchange leads to a brown adipose tissue-specific loss of Ucp3 expression and an altered body mass trajectory.
  Fromme T, Hoffmann C, Nau K, Rozman J, Reichwald K, Utting M, Platzer M, Klingenspor M
  Physiol Genomics 2009, 38(1), 54-62
  
• Centromere sequence and dynamics in Dictyostelium discoideum.
  Glöckner G, Heidel AJ
  Nucleic Acids Res 2009, 37(6), 1809-16
  
• Telomeres shorten while Tert expression increases during ageing of the short-lived fish Nothobranchius furzeri.
  Hartmann N, Reichwald K, Lechel A, Graf M, Kirschner J, Dorn A, Terzibasi E, Wellner J, Platzer M, Rudolph KL, Cellerino A, Englert C
  Mech Ageing Dev 2009, 130(5), 290-6
  
• Gene content and virtual gene order of barley chromosome 1H.
  Mayer KFX, Taudien S, Martis M, Simková H, Suchánková P, Gundlach H, Wicker T, Petzold A, Felder M, Steuernagel B, Scholz U, Graner A, Platzer M, Dolezel J, Stein N
  Plant Physiol 2009, 151(2), 496-505
  
• Comparison of multiplex ligation-dependent probe amplification and real-time PCR accuracy for gene copy number quantification using the beta-defensin locus.
  Perne A, Zhang X, Lehmann L, Groth M, Stuber F, Book M
  Biotechniques 2009, 47(6), 1023-8
  
• High tandem repeat content in the genome of the short-lived annual fish Nothobranchius furzeri: a new vertebrate model for aging research.
  Reichwald K, Lauber C, Nanda I, Kirschner J, Hartmann N, Schories S, Gausmann U, Taudien S, Schilhabel MB, Szafranski K, Glöckner G, Schmid M, Cellerino A, Schartl M, Englert C, Platzer M
  Genome Biol 2009, 10(2), R16
  
• Comparison of methods for quantification of subtle splice variants.
  Schindler S, Heiner M, Platzer M, Szafranski K
  Electrophoresis 2009, 30(21), 3674-81
  
• Proteomic analysis of Legionella-containing phagosomes isolated from Dictyostelium.
  Shevchuk O, Batzilla C, Hägele S, Kusch H, Engelmann S, Hecker M, Haas A, Heuner K, Glöckner G, Steinert M
  Int J Med Microbiol 2009, 299(7), 489-508
  
• X chromosomal variation is associated with slow progression to AIDS in HIV-1-infected women.
  Siddiqui RA, Sauermann U, Altmüller J, Fritzer E, Nothnagel M, Dalibor N, Fellay J, Kaup FJ, Stahl-Hennig C, Nürnberg P, Krawczak M, Platzer M
  Am J Hum Genet 2009, 85(2), 228-39
  
• Accurate prediction of NAGNAG alternative splicing.
  Sinha R, Nikolajewa S, Szafranski K, Hiller M, Jahn N, Huse K, Platzer M, Backofen R
  Nucleic Acids Res 2009, 37(11), 3569-79
  
• Multilocus patterns of nucleotide diversity, population structure and linkage disequilibrium in Boechera stricta, a wild relative of Arabidopsis.
  Song BH, Windsor AJ, Schmid KJ, Ramos-Onsins S, Schranz ME, Heidel AJ, Mitchell-Olds T
  Genetics 2009, 181(3), 1021-33
  
• De novo 454 sequencing of barcoded BAC pools for comprehensive gene survey and genome analysis in the complex genome of barley.
  Steuernagel B, Taudien S, Gundlach H, Seidel M, Ariyadasa R, Schulte D, Petzold A, Felder M, Graner A, Scholz U, Mayer KFX, Platzer M, Stein N
  BMC Genomics 2009, 10, 547