Publications at FLI

2021

• Establishment of a fluorescent reporter of RNA-polymerase II activity to identify dormant cells
  Freter R, Falletta P, Omrani O, Rasa M, Herbert K, Annunziata F, Minetti A, Krepelova A, Adam L, Käppel S, Rüdiger T, Wang ZQ, Goding** CR, Neri** F
  Nat Commun 2021, 12(1), 3318 ** co-corresponding authors
  
• Low-Input Whole-Genome Bisulfite Sequencing.
  Krepelova A, Neri F
  Methods Mol Biol 2021, 2351, 353-68
  
• Characterization of an in vitro 3D intestinal organoid model by using massive RNAseq-based transcriptome profiling.
  Lu J, Krepelova A, Rasa SMM, Annunziata F, Husak O, Adam L, Nunna S, Neri F
  Sci Rep 2021, 11(1), 16668
  
• Mechanistic insights into p53-regulated cytotoxicity of combined entinostat and irinotecan against colorectal cancer cells.
  Marx C, Sonnemann J, Beyer M, Maddocks ODK, Lilla S, Hauzenberger I, Piée-Staffa A, Siniuk K, Nunna S, Marx-Blümel L, Westermann M, Wagner T, Meyer FB, Thierbach R, Mullins CS, Kdimati S, Linnebacher M, Neri F, Heinzel T, Wang ZQ, Krämer OH
  MOL ONCOL 2021, 15(12), 3404-29
  
• A Novel Splice Variant of the Inhibitor of Growth 3 Lacks the Plant Homeodomain and Regulates Epithelial-Mesenchymal Transition in Prostate Cancer Cells.
  Melekhova A, Leeder M, Pungsrinont T, Schmäche T, Kallenbach J, Ehsani M, Mirzakhani K, Rasa SMM, Neri F, Baniahmad A
  Biomolecules 2021, 11(8), 1152
  
• Characterization of the transcriptome, the epigenome, and the microbiome during aging : dietary restriction ameliorates inflammaging
  Rasa SMM
  Dissertation 2021, Jena, Germany
  
• HAT cofactor TRRAP modulates microtubule dynamics via SP1 signaling to prevent neurodegeneration.
  Tapias* A, Lázaro* D, Yin* BK, Rasa SMM, Krepelova A, Kelmer Sacramento E, Grigaravicius P, Koch P, Kirkpatrick J, Ori A, Neri F, Wang ZQ
  Elife 2021, 10, e61531 * equal contribution
  
• DNA methylation modulates allograft survival and acute rejection after renal transplantation by regulating the mTOR pathway
  Zhu C, Xiang W, Li B, Wang Y, Feng S, Wang C, Chen Y, Xie W, Qu L, Huang H, Annunziata F, Nunna S, Krepelova A, Rasa SMM, Neri F, Chen J, Jiang H
  Am J Transplant 2021, 21(2), 567-81
  

2020

• NR2F1 regulates regional progenitor dynamics in the mouse neocortex and cortical gyrification in BBSOAS patients.
  Bertacchi M, Romano AL, Loubat A, Tran Mau-Them F, Willems M, Faivre L, Khau van Kien P, Perrin L, Devillard F, Sorlin A, Kuentz P, Philippe C, Garde A, Neri F, Di Giaimo R, Oliviero S, Cappello S, D'Incerti L, Frassoni C, Studer M
  EMBO J 2020, 39(13), e104163
  
• Intestinal stem cells heterogeneity and clonal dominance during aging: two faces of the same coin?
  Sirvinskas* D, Annunziata* F, Neri F
  Mech Ageing Dev 2020, 189, 111247 * equal contribution